diff --git a/Makefile b/Makefile
index 4f8beac89eeeab3f7ea7239b3982131bc0ad8f00..44986f53276cef0b48f58b6f871460db8fdc6b7e 100644
--- a/Makefile
+++ b/Makefile
@@ -3,7 +3,8 @@ all:
 	cd beaengine; make all
 	cd libIRDB; make all
 	cd xform; make all
-	cd libIRDB; make all
+	cd libMEDSannotation; make all
+	cd libtransform; make all
 	cd tools; make all
 
 clean:
@@ -11,4 +12,6 @@ clean:
 	cd beaengine; make clean
 	cd libIRDB; make clean
 	cd xform; make clean
+	cd libMEDSannotation; make clean
+	cd libtransform; make clean
 	cd tools; make clean